Genetic Diversity Studies of Twenty Eggplant (Solanum spp.) Accessions and their Performance against Root-Knot Nematode (Meloidogyne incognita) Infestation

 

Mohd Nazarudin Anuar1,3*, Noraziyah Abd Aziz Shamsudin1, Tosiah Sadi2, Farah Huda Sjafni Suherman3 and Nur Adliza Baharom3

1Department of Biological Science and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia

2Crop and Soil Science Research Centre, MARDI Headquarters, Persiaran MARDI-UPM, 43400 Serdang, Selangor, Malaysia

3Horticulture Research Centre, MARDI Headquarters, Persiaran MARDI-UPM, 43400 Serdang, Selangor, Malaysia

*For correspondence: nora_aziz@ukm.edu.my

Contributed equally to this work and are co-first authors

Received 07 May 2021; Accepted 11 September 2021; Published 15 November 2021

 

Abstract

 

Eggplant (Solanum melongena L.) is one of the most widely consumed vegetables in Malaysia. The information of eggplant genetic diversity and its resistant to root-knot nematode (RKN) (Meloidogyne incognita) is essential for the eggplant improvement programs in Malaysia. In this study, 20 Malaysian eggplant (Solanum spp.) accessions were evaluated for ten morpho-agronomical and RKN susceptibility traits. The experiment was conducted in Malaysian Agricultural Research and Development Institute (MARDI), Serdang, Selang or using randomized complete block design (RCBD) with four replications. Data on morpho-agronomical and M. incognita reproduction were collected and analyzed using SAS statistical software v. 9.3 (SAS Institute, Cary, NC). The results showed a significant variation among eggplant accessions for all studied traits (P 0.01). All yield-related traits except for number of fruits were positively and significantly correlated with yield per plant. Their correlation coefficient values ranged from 0.679 (fruit length) to 0.923 (fruit weight). Unweighted pair group method with arithmetic mean (UPGMA) dendrogram grouped these 20 eggplant accessions into four clusters, with cluster IV recording the highest mean of yield and yield component traits. Meloidogyne incognita infection caused root gall symptoms on all the Solanum spp. accessions except for S. torvum accessions, NTH 08-0024 and NTH 08-0041, thus these two accessions were considered as immune to RKN. In addition to that, two S. melongena accessions, DINO 03-0200 and DINO 03-0056 were found highly resistant while another accession, NTH 08-0131 was categorized as tolerant. High-yielding and RKN-resistant accession, DINO 03-0056 was identified as the most important accession due to both its high yield and RKN resistance. © 2021 Friends Science Publishers

 

Keywords: Meloidogyne incognita; Morpho-agronomical traits; Root gall; Solanum spp.; Yield components

 


Introduction

 

Eggplant is among the important nutritious vegetables, and cultivated across tropical and sub-tropical region, with more than 1.79-million-hectare (ha) of lands being used for brinjal cultivation (Kumar et al. 2020). Eggplant is believed to originate from India, and spread throughout the world where currently, 90% of the global eggplant production is concentrated in Asian region, with India and China as the main producer (Kumar et al. 2020; Wei et al. 2020). It is one of the important sources for fiber diets, vitamins, minerals, and antioxidant compounds in vegetables. Anthocyanins in eggplant provide antioxidants and free radical scavengers, which are able to reduce disease risks such as cancer, cardiovascular disease, hypertension and diabetes (Famuwagun et al. 2021; Zhou et al. 2021). Due to the high nutritive value, eggplant is consumed as a staple food to tackle malnutrition problems in certain regions in Africa (Famuwagun et al. 2021).

Eggplant production suffers reduced in plant growth and yield due to various pests and diseases problems, including parasitic nematodes infection. The root-knot nematode (RKN), Meloidogyne incognita occurs globally, with a broad host range including Solanaceae group (Papolu et al. 2020). This nematode has been reported infecting various types of fruit and vegetable crops in Malaysia, and a broad host range including eggplant (Musa et al. 2020; Leong et al. 2021). Previous studies have reported on RKN infestation on eggplant genotypes, causing a significant plant growth and yield reduction (Musa et al. 2020; Papolu et al. 2020). Infection of Meloidogyne spp. together with other pathogens, such as Fusarium and Verticillium has been reported to cause eggplant yield reduction by up to 78% (Musa et al. 2020). Until now, the eggplant production heavily relies on the application of chemicals to combat pests and diseases, including nematode-related problems, resulting in development of resistance in the targeted pests or pathogen (Sim et al. 2019; Musa et al. 2020). While chemical application is the most effective method, it is known to adversely affect the environment and human health. Hazardous nematicides such as Oxamyl have been withdrawn from the local market due to possible contamination of groundwater and health issues (Khairiah et al. 2016; Musa et al. 2020). Therefore, utilization of resistant varieties is considered the best alternative to chemical application to overcome nematode infestation in an integrated management of nematode. Use of the resistant varieties can encourage the proliferation of local natural enemies while reducing the overall production costs (Ogunnupebi et al. 2020).

Together with the plant genetic diversity analysis, this information is important for crop management and improvement through breeding technique. A successful selection depends on the value of heritability and genetic advance in relation to the average performance of the trait. Compared to cultivated species, the wild accession of eggplant shows a broader genetic diversity, especially in tolerance to abiotic stresses, pests and diseases (Kaushik et al. 2016; Sargın and Devran 2021). However, the lack of information about disease-resistant varieties, especially nematode-caused diseases, has driven this study. Eggplants have also shown a great level of genetic polymorphisms, especially in vegetative traits such as fruit shape and color. Therefore, the objectives of this study are to determine the genetic diversity of 20 local Malaysian eggplant (Solanum spp.) accessions based on their morpho-agronomical traits, and to identify the most promising accessions with high yield and RKN-resistant traits.

 

Materials and Methods

 

Plant materials and cultural practices

 

The experiment was conducted in the Greenhouse Unit, Horticulture Research Centre, Malaysia Agriculture and Development Institute (MARDI) Serdang, Selangor, Malaysia which was located on latitude 101o46'E, and longitude 3o17'N with an average temperature of 2430 ± 2oC and 7081% relative humidity. The experiments were conducted for two planting seasons, from January to June 2018 for the first season and from July to December 2018 for the second season. Twenty eggplant (Solanum spp.) accessions were obtained from MARDI eggplant germplasm collection. The accessions name, species type and fruit morphology descriptions are shown in Table 1. The eggplant seeds were pre-germinated in 30-hole seed tray prefilled with peat moss and maintained for four weeks. Healthy four-week-old seedlings with five to six true leaves were selected and transplanted into individual 1900 mL pots containing sterilized soil mixture (70% topsoil: 15% sand: 15% organic matter). Each eggplant plant was fertilized manually once in two weeks at the rate of 30 g per plant (NPK 16:16:16) for the first time before continuing with 40 g per plant of NPK 12:12:17 until the experiment ended. Standard cultural practices and other plant maintenance, such as pest and disease control management and weeding were carried out as needed.

 

Morpho-agronomical screening

 

Four-week-old plants were selected and subjected to the randomized complete block design (RCBD) with four replications. Each replication contained five plants per accession, and each was planted 90 cm between plants. Data on plant height (PH), days to 50% flowering (DT50F), plant spread (PS), stem diameter (SD), number of primary branches (NB), number of fruits per plant (NF), fruit weight (FW), fruit length (FL), fruit girth (FG) and yield per plant (YLD) were collected at 12 weeks after transplanting.

 

Meloidogyne incognita inoculum preparation

 

The M. incognita inoculum used in the study was obtained from RKN cultures deposited in the nematology greenhouse at MARDI Serdang, Malaysia where they were maintained on susceptible eggplant (S. melongena) cv. black purple round. The infested eggplant roots were uprooted, gently washed, and chopped into 1–2 cm sections before being vigorously shaken in 0.5% NaOCl for five minutes (Hussey and Barker 1973). Root fragments were washed through 45 µm sieve and suspended in 100 mL distilled water to collect the nematode eggs. A 10 mL sample of suspension was taken, and the eggs were counted under stereomicroscope to estimate the egg population. Final eggs inoculum concentration was adjusted to obtain approximately 5,000 eggs in a 10 mL test tube.

 

Evaluation of susceptibility against Meloidogyne incognita

 

Five plants from each accession were selected and arranged in a randomized complete block design (RCBD) with four replications. Two weeks after planting, 5,000 M. incognita eggs were inoculated at the surrounding of the plant base. The experiment was terminated eight weeks after the nematode inoculation. At the end of the experiments, roots from each plant were harvested and gently washed under tap water until cleaned before being observed under dissecting microscope and rated to gall index (GI) (Bridge and Page 1980) from 0 (no galls) to 10 (100% galled) scale. Nematode eggs were extracted using 1% NaOCl (Hussey and Barker 1973) and the numbers of eggs per gram root (ER) were recorded.

 

Statistical analysis

 

The genetic variability among the 20 local eggplant (Solanum spp.) accessions, broad sense heritability (h2B) and other genetic parameters were calculated using the following equations (Burton 1952; Burton and Vane 1953; Johnson et al. 1955; Allard 1960):

 

(a) Genotypic variance (σ2g):

σ2g = (MSg - MSe)/r

 

(b) Phenotypic variance (σ2p):

σ2p = σ2g + σ2e

 

(c) Genotypic coefficient of variance (GCV):

GCV =/x 100

 

(d) Phenotypic coefficient of variance (PCV):

PCV = /x 100

 

(e) Broad sense heritability (h2B):

h2B (%) = σ2g2p x 100

 

(f) Expected genetic advance (GA):

GA% = k x /x h2B x 100

 

where σ2g is the genotypic variance, σ2e and MSe are the mean squares of error, MSg is the mean square of accessions, r is number of replications, σ2p is the phenotypic variance,  is the grand mean of the traits, h2B is the heritability, k is the standardized selection differential at 5% selection intensity (2.063), and σp is the phenotypic standard deviation.

Unweighted pair group method with arithmetic mean (UPGMA) and sequential agglomerative hierarchical non-overlapping (SAHN) clustering method were applied using NTSYS-pc software version 2.10 (Rohlf 2000) to calculate the genetic relationships among the eggplant accessions. The morpho-agronomical data were statistically analyzed using one-way analysis of variance (ANOVA) with means separated by New Duncan Multiple Range Test (NDMRT) using the SAS statistical software v. 9.3 (SAS Institute, Cary, NC) to determine different responses of eggplant accessions in terms of its morpho-agronomical traits. The correlation coefficient was analyzed to determine the relationships among traits using Pearson’s correlation. The nematode reproduction data were analyzed using SAS statistical software v. 9.3 (SAS Institute, Cary, NC). Data of ER and gall index (GI) were log transformed [log10(x+1)] to homogenize the variances before subjecting them to one-way ANOVA with means separated by Tukey’s HSD tests (P 0.05).

Results

 

Variation among local Malaysian eggplant accessions

 

The analysis of variance (ANOVA) revealed that the mean squares due to accessions (A) were highly significant (P < 0.01) for all morpho-agronomical traits observed in this study. However, non-significant mean squares due to season (S) and season by accession interaction (S × A) were also obtained for all studied traits (Table 2). The coefficient of variation (CV) was low to high (ranged from 6.53 to 39.62%). The data of days to 50% flowering ranged from 37.83 days to 67.93 days with mean of 49.22 days, with the earliest and the latest flowering accession being DINO 03-0062 and DINO 03-0009, respectively (Table 3). Accession DINO 03-0222 had the lowest value for plant height (36.17 cm) and plant spread (19.24 cm) while accession NTH 08-0041 had the highest value of plant height and plant spread (158.79 cm and 84.47 cm, respectively). Stem diameter ranged from 2.57 cm to 6.11 cm with mean of 3.77 cm while the number of primary branches ranged from 5.75 to 14.05. Table 1: Description of the 20 Malaysian eggplant (Solanum spp.) accessions

 

No.

Accessions Name

Species

Description of the eggplant fruit

1

NTH 08-0024

S. torvum

Tiny, round, green colour

2

NTH 08-0041

S. torvum

Tiny, round, green colour

3

DINO 03-0200

S. melongena

Small, round, yellow colour

4

DINO 03-0056

S. melongena

Big, round, white colour

5

NTH 08-0077

S. melongena

Small, round, purple colour

6

DINO 03-0223

S. melongena

Small, round, purple colour

7

DINO 03-0014

S. melongena

Medium, oblong, green colour

8

DINO 03-0009

S. melongena

Medium, oblong, green colour

9

DINO 03-0028

S. melongena

Medium, oblong, green colour

10

DINO 03-0038

S. melongena

Medium, oblong, green colour

11

DINO 03-0045

S. melongena

Medium, oblong, green colour

12

DINO 03-0144

S. macrocarpon

Big, round, yellow colour

13

DINO 03-0222

S. melongena

Medium, Long, purple colour

14

NTH 08-0131

S. melongena

Medium, Long, purple colour

15

DINO 03-0075

S. ferox

Small, round, yellow colour

16

DINO 03-0091

S. ferox

Small, round, yellow colour

17

DINO 03-0062

S. melongena

Small, round, white colour

18

DINO 03-0162

S. macrocarpon

Big, round, yellow colour

19

MTe-01

S. melongena

Long, purple colour

20

MTe-02

S. melongena

Big, round, purple colour

 

Table 2: Analysis of variance of morpho-agronomical traits of 20 eggplant (Solanum spp.) accessions

 

Sources of Variation

Season (S)

Replication (R)

Accession (A)

S x A

Error

CV (%)

DF

1

3

19

19

117

 

DT50F (days)

41.88ns

198.58**

357.41**

23.04ns

10.32

6.53

PH (cm)

9.11ns

766.62**

6322.47**

117.52ns

38.94

13.63

PS(cm)

2.57ns

217.07**

906.91**

33.25ns

19.81

13.63

SD (cm)

0.08ns

1.4**

6.26**

0.34ns

0.17

10.97

NB

0.06ns

10.56**

51.96**

2.54ns

1.23

12.35

NF

18.63nns

100.83**

847.46**

14.62ns

17.32

15.97

FW(g)

55.93ns

6.23**

13519.77**

91.05ns

306.76

39.62

FL (cm)

78.69ns

12.25ns

350.56**

19.66ns

7.81

27.57

FG (cm)

9.58ns

11.46**

228.06**

22.41ns

5.37

24.02

YLD (g)

33,180.48ns

21,090.43**

2,549,402.12**

176,819.09ns

65,079.33

31.66

DT50F: days to 50 % flowering (day); PH: plant height 12 weeks after transplant (cm); PS: plant spread 12 weeks after transplant (cm); SD: stem diameter 12 weeks after transplant (cm); NB: number of primary branches 12 weeks after transplant; NF: number of fruits per plant; FW: fruit weight (g); FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant (g)

**Significant at P 0.01; nsNon-significant at P > 0.05; DF: degree of freedom at 0.05; CV (%): coefficient of variation (%)

 

Accession NTH 08-0024 had the highest number of fruits per plant (67.30) while accession MTe-01 had the lowest value for number of fruits per plant (13.73). In terms of yield and its components, accession MTe-02 recorded the highest values for three important traits, which were yield per plant (1,819.58 g), fruit weight (134.70 g) and fruit girth (18.83 cm) while accession NTH 08-0041 recorded the lowest values for fruit weight (2.50 g), fruit length (0.74 cm), fruit girth (1.25 cm) and yield per plant (178.34 g).

 

Correlation among traits

 

Pearson’s correlation coefficients between ten quantitative traits of the 20 eggplant accessions are shown in Table 4. The yield per plant was highly significant and positively correlated (P 0.01) with its components, such as fruit weight (0.958), fruit girth (0.904) and fruit length (0.670) but significantly and negatively correlated with the number of fruits per plant (-0.502, P 0.05). Plant vegetative traits were negatively correlated with yield per plant, ranging between -0.095 (days to 50% flowering) and -0.492 (stem diameter).

 

Genetic analysis, broad-sense heritability and genetic advance

 

In this study, genotypic variances ranged from 0.76 (stem diameter) to 310,540.35 (yield per plant) and phenotypic variances ranged from 0.93 (stem diameter) to 375,619.68 (yield per plant) (Table 5). High genotypic variance values of 310,540.35, 1,651.63 and 785.44 were obtained for yield per plant, fruit weight and plant height, respectively. Similarly, high phenotypic variance values of 375,619.68, 1,958.39 and 824.38 were obtained for yield per plant, fruit weight and plant height, respectively. In this study, genotypic coefficient variation (GCV) for yield and its related traits were medium to high, ranging Table 3: Means for 10 morpho-agronomical traits of the 20 eggplant accessions

 

Accessions

DT50F (day)

PH (cm)

PS (cm)

SD (cm)

NB

NF

FW (g)

FL (cm)

FG (cm)

YLD (g)

NTH 08-0024

50.88 ± 5.96 ed

109.38 ± 22.11 b

58.18 ± 11.08 a

4.34 ± 0.9 d

12.35 ± 2.03 d

67.3 ± 7.57 a

2.89 ± 0.48 d

0.75 ± 0.12 h

1.28 ± 0.21 l

240.51 ± 40.58 hi

NTH 08-0041

47.13 ± 5.82 eghf

158.79 ± 34.1 a

84.47 ± 9.93 b

5.16 ± 1.1 c

10.26 ± 1.88 d

61.95 ± 7.26 b

2.5 ± 0.4 d

0.74 ± 0.11 h

1.25 ± 0.2 l

178.34 ± 28.36 i

DINO 03-0200

49.95 ± 6.18 ikj

70.2 ± 7.76 l

37.34 ± 3.88 i

3.51 ± 0.74 hg

7.84 ± 1.16 fe

29.65 ± 5.49 c

23.6 ± 4.55 c

9.37 ± 0.86 gf

6.94 ± 1.34 j

615.87 ± 133.62 c

DINO 03-0056

49.85 ± 10.57 edf

54.82 ± 12.63 g

29.16 ± 6.98 c

3.06 ± 0.67 ji

8.04 ± 1.15 fe

18.98 ± 4.74 hgi

132.96 ± 57.13 a

15.33 ± 2.55 e

19.34 ± 4.61 a

1955.92 ± 430.32 a

NTH 08-0077

45.88 ± 5.34 eghf

65.84 ± 8.69 lk

35.02 ± 4.58 ed

4.06 ± 0.82 e

8.87 ± 1.07 f

28.35 ± 3.42 ed

23.33 ± 4.26 c

3.72 ± 0.84 gf

7.65 ± 2.09 gf

511.49 ± 131.11 c

DINO 03-0223

43.48 ± 4.83 ihj

71.66 ± 9.36 jk

38.12 ± 1.25 hi

3.41 ± 0.71 hi

7.16 ± 1.19 fe

24.73 ± 4.2 hgf

20.1 ± 2.47 dc

3.73 ± 0.78 gf

10.91 ± 2.34 ef

672.35 ± 91.18 fge

DINO 03-0014

50.13 ± 10.89 edf

43.59 ± 5.09 e

23.19 ± 3.74 f

2.99 ± 0.63 jk

7.08 ± 1.19 fe

19.23 ± 6.82 ji

14 ± 3.85 dc

13.51 ± 2.88 dc

8.01 ± 1.83 ih

417.74 ± 139.37 c

DINO 03-0009

67.93 ± 8.74 a

73.11 ± 15.7 de

38.89 ± 3.63 f

3.76 ± 0.8 fe

7.31 ± 1.38 fe

23.28 ± 3.82 hgf

17.71 ± 3.83 dc

14 ± 2.97 dc

9.07 ± 2.27 gh

551.25 ± 118.47 dce

DINO 03-0028

51.43 ± 5.65 ed

77.56 ± 16.65 dc

41.26 ± 5.05 hi

3.6 ± 0.77 fg

7.5 ± 1.47 e

24.88 ± 4.56 ef

19.27 ± 3.53 dc

14.43 ± 3.05 dc

7.88 ± 1.77 ih

589.45 ± 125 c

DINO 03-0038

58.35 ± 6.88 b

67.17 ± 14.43 fe

35.73 ± 1.36 hi

3.08 ± 0.66 j

8.11 ± 1.28 fe

20.3 ± 6.96 hgi

14.76 ± 2.69 dc

15.24 ± 3.41 c

7.13 ± 1.51 ij

526.82 ± 122.27 dc

DINO 03-0045

56.33 ± 6.26 cb

69.81 ± 14.99 e

37.13 ± 1.33 hi

3.5 ± 0.74 hg

7.52 ± 1.21 fe

25.38 ± 4.76 edf

19.56 ± 3.49 dc

14.07 ± 3.23 dc

6.74 ± 1.43ij

645.99 ± 139.28 c

DINO 03-0144

45.75 ± 4.95 ghf

40.46 ± 7.28 c

21.52 ± 6.37 c

3.95 ± 0.84 e

14.05 ± 2.21 d

38.1 ± 4.73 kj

31.64 ± 6.06 c

5.33 ± 1.16 f

11.87 ± 2.65 ed

499.65 ± 105.65 b

DINO 03-0222

42.95 ± 4.98 ghf

36.17 ± 14.46 fe

19.24 ± 3.93 ef

2.83 ± 0.6 k

8.61 ± 1.34 fe

15.78 ± 1.72 kj

102.57 ± 28.51 b

12.66 ± 2.72 de

18.36 ± 3.91 d

1794.4 ± 342.06 b

NTH 08-0131

50 ± 6.16 edf

47.79 ± 10.26 ji

25.42 ± 1.77 hg

2.57 ± 0.55 l

6.88 ± 2.87 c

16.93 ± 2.98 kji

115.63 ± 31.4 b

20.37 ± 4.33 b

14.84 ± 3.27 c

1593.01 ± 362.75 a

DINO 03-0075

48.53 ± 5.35 egdf

61.43 ± 13.19 fg

32.68 ± 3.91 ef

5.74 ± 1.22 b

12.09 ± 7.18 a

24.75 ± 3.37 egf

20.48 ± 3.93 dc

4.27 ± 1 gf

6.88 ± 1.47 ij

292.35 ± 91.11 dfge

DINO 03-0091

52.18 ± 5.44 cd

40.46 ± 8.69 lk

21.52 ± 4.74 d

3.95 ± 0.24 e

14.05 ± 1.01 d

29.2 ± 3.15 d

23.71 ± 4.38 dc

3.31 ± 0.74 g

4.58 ± 1.02 k

294.34 ± 73.64 hgi

DINO 03-0062

37.83 ± 6.08 k

41.16 ± 8.84 lk

21.9 ± 1.2 hi

3.04 ± 0.65 jk

5.75 ± 0.74 g

20.33 ± 2.98 hi

16.81 ± 3.89 dc

3.38 ± 0.76 g

4.36 ± 0.98 k

295.77 ± 69.31 hgi

DINO 03-0162

44.7 ± 4.54i gh

51.87 ± 11.14 hi

27.59 ± 4.03 ef

6.11 ± 1.3 a

13.05 ± 3.28 b

25.63 ± 3.72 edf

 ± 3.63 dc

3.2 ± 0.7 g

6.41 ± 1.48 ij

365.36 ± 79.18 hfg

MTe-01

51.6 ± 6.45 ed

55.87 ± 12 hg

29.72 ± 2.21 g

2.98 ± 0.63 jk

6.23 ± 1.28 fe

13.73 ± 1.72 kji

97.67 ± 25.77 b

27.28 ± 5.8 a

13.13 ± 2.7 9 d

1876.56 ± 396.11 a

MTe-02

39.48 ± 9.91 kj

50.76 ± 10.9 hi

27 ± 1.89 hi

3.76 ± 0.8 fe

7.85 ± 1.13 fe

20.6 ± 4.16 hi

134.7 ± 39.7 a

13.05 ± 2.82d e

18.83 ± 4.37 b

1819.58 ± 396.81 a

Mean S1

49.77

64.16

34.13

3.79

9.09

27.11

41.83

10.33

9.14

782.23

Mean S2

48.66

64.63

34.38

3.75

8.97

27.79

43.61

9.44

9.40

791.45

Total mean

49.22

64.39

34.25

3.77

9.03

27.45

42.72

9.89

9.27

786.84

DT50F: days to 50 % flowering (day); PH: plant height 12 weeks after transplant (cm); PS: plant spread 12 weeks after transplant (cm); SD: stem diameter 12 weeks after transplant (cm); NB: number of primary branches 12 weeks after transplant; NF: number of fruits per plant; FW: fruit weight (g); FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant (g)

Means ± standard deviation followed by the same letter did not differ according to DNMRT tests (P > 0.05)

 

Table 4. Correlation coefficient analysis among morpho-agronomical traits for 20 eggplant accessions

 

 

PH

PS

SD

NB

NF

FW

FL

FG

YLD

DT50F

0.209

0.209

0.028

0.043

0.025

-0.174

0.389**

-0.106

-0.095

PH

 

1.000**

0.397**

0.077

0.752**

-0.377**

-0.314**

-0.474**

-0.342**

PS

 

 

0.397**

0.077

0.752**

-0.377**

-0.314**

-0.474**

-0.342**

SD

 

 

 

0.674**

0.468**

-0.391**

-0.558**

-0.419**

-0.492**

NB

 

 

 

 

0.525**

-0.259*

-0.535**

-0.286**

-0.378**

NF

 

 

 

 

 

-0.459**

-0.621**

-0.583**

-0.502**

FW

 

 

 

 

 

 

0.558**

0.904**

0.958**

FL

 

 

 

 

 

 

 

0.543**

0.670**

FG

 

 

 

 

 

 

 

 

0.904**

 

DT50F: days to 50 % flowering (day); PH: plant height 12 weeks after transplant (cm); PS: plant spread 12 weeks after transplant (cm); SD: stem diameter 12 weeks after transplant (cm); NB: number of primary branches 12 weeks after transplant; NF: number of fruits per plant; FW: fruit weight (g); FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant (g)

*Significant at P 0.05. **Significant at P 0.01

 

from 39.08 to 91.94% while for vegetative traits, the values ranged from 13.40 to 45.64% (low to medium). Higher phenotypic coefficient variation (PCV) was also recorded for yield and yield-related traits (ranged from 42.22 to 100.11%) compared to vegetative traits (ranged from 14.91 to 46.76%). Two vegetative traits, days to 50% flowering (GCV = 13.40%, PCV = 14.91%) and fruit weight (GCV = 91.94%, PCV = 100.11%) had the lowest and highest of genotypic and phenotypic coefficient variation values, respectively.

High broad sense heritability (h2B) estimates were between medium and high for most traits, with the highest heritability value recorded for plant height (95.28%), followed by number of fruits per plant (85.70%) and plant spread (84.84%). The highest and the lowest heritability values were recorded for plant height (95.28%) and fruit girth (78.94%), respectively. The genetic advance (GA) values ranged from 24.80% for days to 50% flowering to 173.92% for fruit weight, but in general, the genetic advance values for vegetative traits were higher than the GA values for yield and its components.

 

Clustering analysis

 

Twenty accessions of local Malaysian eggplant were clustered into four clusters with a similarity coefficient of 0.21 (Fig. 1). Cluster I was the smallest group that consisted of both S. torvum accessions (NTH 08-0024 and NTH 08-0041). Cluster II was the biggest cluster with eight members, comprising of accessions DINO 03-0075, DINO 03-0091, DINO 03-0162, DINO 03-0144, DINO 03-0062, DINO 03-0200 NTH 08-0077 and DINO 03-0223. Both cluster III and IV shared the same number of accessions which was five accessions per cluster. Cluster III was comprised of accession DINO 03-0009, DINO 03-0014, DINO 03-0028, DINO 03-0038 and DINO 03-0045 while cluster IV consisted of accession MTe-02, DINO 03-0056, DINO 03-0222, NTH 08-0131 and MTe-01.

Both accessions from cluster I showed the highest value of plant vegetative traits (plant height, plant spread, stem diameter and number of primary branches), but had the lowest yield per plant (0.175 kg) and yield related traits (fruit weight, Table 5: Analysis of genetic variance, broad-sense heritability, and genetic advance for ten morpho-agronomical traits in 20 eggplant (Solanum spp.) accessions

 

Traits

Mean

𝜎2g

𝜎2p

GCV (%)

PCV (%)

H2B (%)

GA (%)

DT50F

49.17

43.39

53.71

13.4

14.91

80.78

24.8

PH

61.4

785.44

824.38

45.64

46.76

95.28

91.77

PS

32.66

110.89

130.7

32.24

35

84.84

61.17

SD

3.74

0.76

0.93

23.33

25.78

81.91

43.5

NB

8.97

6.34

7.57

28.06

30.66

83.77

52.9

NF

26.06

103.77

121.09

39.08

42.22

85.7

74.53

FW

44.21

1651.63

1958.39

91.94

100.11

84.34

173.92

FL

10.14

42.84

50.66

64.56

70.2

84.58

122.31

FG

9.65

20.13

25.5

46.5

52.34

78.94

85.12

YLD

805.85

310540

375620

69.15

76.05

82.67

129.53

𝜎2g: genotypic variation; 𝜎2p: phenotypic variation; GCV: genotypic coefficient variation; PCV: phenotypic coefficient variation; H2B: broad-sense heritability; GA: genetic advance; DT50F: days to 50 % flowering (day); PH: plant height 12 weeks after transplant (cm); PS: plant spread 12 weeks after transplant (cm); SD: stem diameter 12 weeks after transplant (cm); NB: number of primary branches 12 weeks after transplant; NF: number of fruits per plant; FW: fruit weight (g); FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant (g)

 

ChartDescription automatically generated

 

Fig. 1: Relationship among the 20 eggplant (Solanum spp.) accessions based on ten quantitative traits using unweighted pair group method with arithmetic mean (UPGMA) at a 0.21 similarity coefficient

 

fruit girth and fruit length) except for number of fruits per plant (Table 6). Cluster II was comprised of three different eggplant species, including S. melongena, S. macrocarpon and S. ferox. This cluster was characterized with the earliest flowering, and highest mean of stem diameter, number of primary branches and fruit girth. Cluster III was characterized by small plant appearance (lowest plant height and plant spread mean) and late flowering while cluster IV showed an average performance in terms of plant vegetation, but better in fruit morphology and yield.

 

Evaluation of 20 eggplant accessions against Meloidogyne incognita infection

 

The inoculation of M. incognita eggs on the eggplant plants showed a significant response among the tested accessions at eight weeks after the nematode inoculation (P 0.05) (Table 7). Generally, most of the eggplant accessions showed a gall symptom on the root system except for S. torvum accessions (NTH 08-0024 and NTH 08-0041). The eggs per gram root was higher than the initial egg inoculation (5,000 eggs) for other eggplant accessions, with accession DINO 03-0062 being the most susceptible with the highest production of eggs per gram root (32,209 eggs). The gall index values ranged between 1.11 and 7.52, with accession MTe-01 showing the highest value.

Among the eggplant accessions, accession DINO 03-0200 and DINO 03-0056 showed a highly-resistant response against M. incognita with the lowest eggs per gram root (ER) (839 eggs and 915 eggs, respectively), followed by accession NTH 08-0077 (4,371 eggs); they showed significant difference (P 0.05) compared to the other eggplant accessions (Table 6). Both accession DINO 03-0200 and DINO 03-0056 also produced the lowest gall index (1.11 and 1.63, respectively) (P 0.05). Four accessions (NTH 08-0077, DINO 03-0009, DINO 03-0038 and DINO 03-0028) produced below 50% eggs per gram root compared to accession DINO 03-0062, indicating a moderate resistant. Twelve eggplant accessions were susceptible, with egg production ranging between 16,228 and 32,209 eggs per gram root while the gall index ranged between 3.53 and 7.52. Accession MTe-01 and MTe-02 showed the highest gall index (7.52 and 6.92, respectively) (P 0.05). In these studies, we found that more than half of the eggplant accessions were susceptible because the M. incognita successfully reproduced compared to the initial inoculation population.

Table 6: Cluster group and quantitative traits mean

 

Cluster

DT50F

PH

PS

SD

NB

NF

FW

FL

FG

YLD

I

49.47

130.87

69.61

4.71

11.50

65.27

2.69

0.74

1.25

211.01

II

45.47

55.23

29.38

4.05

9.85

27.25

22.18

4.95

7.63

452.75

III

58.49

71.91

38.25

3.48

7.61

23.46

17.82

14.43

7.70

578.38

IV

46.79

49.88

26.53

3.06

7.58

17.56

119.63

17.08

17.31

1821.48

DT50F: days to 50 % flowering (day); PH: plant height 12 weeks after transplant (cm); PS: plant spread 12 weeks after transplant (cm); SD: stem diameter 12 weeks after transplant (cm); NB: number of primary branches 12 weeks after transplant; NF: number of fruits per plant; FW: fruit weight (g); FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant (g)

 

Table 7: Means comparison of three different nematode reproduction index on 20 eggplant (Solanum spp.) accessions

 

Accession

ER

GI

Host status

NTH 08-0024

0 i

0 i

I

NTH 08-0041

0 i

0 i

I

DINO 03-0200

839 ± 6 i

1.11 ± 0.19 h

HR

DINO 03-0056

915 ± 36 i

1.63 ± 0.21 h

HR

NTH 08-0077

4371 ± 80 h

3.38 ± 0.25 g

MR

DINO 03-0223

18663 ± 458 def

3.98 ± 0.46 feg

S

DINO 03-0014

17514 ± 1123 def

3.53 ± 0.29 fg

S

DINO 03-0009

12717 ± 388 g

3.75 ± 0.72 fg

MR

DINO 03-0028

11738 ± 469 g

3.71 ± 0.37 fg

MR

DINO 03-0038

12386 ± 474 g

3.79 ± 0.66 feg

MR

DINO 03-0045

22229 ± 957 c

3.80 ± 0.47 feg

S

DINO 03-0144

17216 ± 1812 ef

4.74 ± 0.42 ced

S

DINO 03-0222

16228 ± 1266 f

4.35 ± 0.77 fed

S

NTH 08-0131

16860 ± 675 ef

5.07 ± 0.53 cbd

S

DINO 03-0075

19960 ± 1365 dc

5.03 ± 0.21 cbd

S

DINO 03-0091

19204 ± 1643 de

5.65 ± 1.64 cbd

S

DINO 03-0062

32209 ± 4847 a

5.72 ± 0.52 b

S

DINO 03-0162

21901 ± 395 c

5.78 ± 0.54 b

S

MTe-01

26992 ± 1178 b

7.52 ± 0.48 a

S

MTe-02

27352 ± 1787 b

6.92 ± 0.37 a

S

ER: eggs per gram root; GI: gall index; Host status is based on production of eggs per gram root relative to the most susceptible accession (DINO 03-0062) where no egg detected = immune (I), eggs per gram root < 10% = highly resistant (HR), eggs per gram root < 50% = moderately resistant (MR), eggs per gram root > 50% = susceptible (S)

Means ± standard deviation followed by the same letter did not differ according to Tukey’s HSD tests (P > 0.05)

 

Discussion

 

The combined analyses of variance for morphology and yield traits from two cropping seasons showed a highly significant difference (P 0.01) among the accessions for all parameters measured. These results strongly indicated that some tested eggplant accessions had a potential to be used as parents in the eggplant breeding program either to enhance yield or vegetative traits. However, there was no significant difference (P > 0.05) between cropping seasons and season by accession interaction (S × A) for all parameters, revealing that the cropping season did not affect the performance of eggplant accessions. A high value of CV for fruit weight and yield per plant indicates that these two traits are important to differentiate between the eggplant accessions used in this study. This result was expected as these accessions were selected from different eggplant Solanum species. Sulaiman et al. (2020) also reported a significant difference on these two traits, and concluded that it was related to the origin of each eggplant accession. A similar study by Caguiat and Hautea (2014) has also shown the same results on the phenotypic variation among eggplant accessions. Naujeer (2009) strongly suggested that eggplant breeding programs could be enhanced through direct selection of yield and its components to produce superior hybrids. Generally, accession NTH 08-0041 showed a better performance in terms of morphology while accession DINO 03-0056 had the best overall performance, especially for yield and yield-related traits except for the number of fruits in both cropping seasons. Accession NTH 08-0041 which belongs to species S. torvum is known for its bigger size compared to other eggplant species, but it lacks fruit characteristics and yield. Meanwhile, accession DINO 030056 from species S. melongena was proven to be a commercial species for eggplant with higher yield and better fruit appearance. Naujeer (2009) also found similar correlations between S. torvum and S. melongena species in terms of their morphology, yield and fruit appearances. Other than that, S. torvum is more resistant to pest and disease compared to other eggplant species, and suggested as alternative rootstock for more susceptible eggplant species (Leong et al. 2021).

The highly significant correlation values between the yield and its components except for the number of fruits indicated that improvements in these yield-related traits can lead to improvements in eggplant yield per plant. A highly significant and positive correlation (P 0.01) between yield per plant and its components (fruit weight, fruit length and fruit girth) have also been reported earlier (Singh et al. 2018; Arti et al. 2019). Fruit weight, fruit length and fruit girth were the main contributing traits towards yield per plant, and selection based on these secondary traits might be effective for developing high-yielding eggplant cultivars. The negative correlation between vegetative morphology with yield per plant showed that a small-size eggplant accession such as DINO 03-0056 and DINO 03-0222 could produce a higher yield per plant. The significant negative correlation between yield and vegetative morphology was also observed by Thangamani and Jansirani (2012). However, days to 50% flowering and number of primary branches traits showed slightly positive impact on yield per plant for some eggplant accession. Previous studies also observed a positive correlation between days to 50% flowering and number of primary branches (NB) (Akpan et al. 2016; Onyia et al. 2020). This contrasting finding might be due to the different species of eggplant and accessions used in the experiment.

The estimation of the GCV showed a low to high value, indicated by days to 50% flowering and fruit weight, respectively. In this study, high GCV values were obtained in fruit weight and yield per plant, indicating that there was considerable genetic variations in both traits that could be used in the future selection to produce better eggplant cultivars, especially in terms of yield improvement. Meanwhile, the lowest GCV was recorded by days to 50% flowering, indicating a limited genetic selection and that the trait phenotypic expression was highly influenced by the environment. The PCV also recorded a low to high value, with the highest value indicated by fruit weight. The selection based on high value of PCV, such as in fruit weight and yield per plant indicates a greater potential is expected in the selection of this traits, depending on the amount of variability present (Kumar et al. 2020). The value between GCV and PCV obtained from this study had low difference, indicating that the vegetative traits were not highly affected by the environmental factors, and successful selection could be achieved based on the phenotypic values. These findings were corroborated by the previous studies which observed a slight value difference between GCV and PCV for vegetative traits in eggplants (Kumar et al. 2020; Sulaiman et al. 2020). Higher PCV values compared to GCV values for all vegetative and yield traits in this study also indicated the existence of environmental influence on the phenotypic traits. These small differences between PCV and GCV values proposing the governance of genetic factors. Hence, the direct selection on a phenotypic basis would be effective in plant breeding as that trait are mainly influenced by the genetic factors instead of the environmental factors. This finding shows the importance of adaptive capacity to the environment for future crop breeding program. Other researchers also previously reported the higher values of GCV, PCV and heritability for yield per plant and its related traits in Solanum species, conforming the results obtained in these studies (Madhukar et al. 2015; Yadav et al. 2016).

Heritability is one of the important genetic components where the proportion of phenotypic traits or total variance is inherited down to the progeny (Oladosu et al. 2014). A higher range of high broad-sense heritability was observed for all vegetative and yield component traits, with the highest value indicated by plant height (PH). High broad-sense heritability (h2B) values also ensure the success of a breeding program through the selection of most-consistent parental accessions (Sulaiman et al. 2020). Yield per plant and its components (number of fruits, fruit weight, fruit length and fruit girth) in this study showed a high value of broad-sense heritability and genetic advance (GA), suggesting that a direct selection for both traits may produce a significant improvement in plant vegetative and yield per plant. This finding also suggests an additive type of genes action that controls the yield and its components. Therefore, a higher GA and broad-sense heritabilityvalues, especially for yield and its components are desired by plant breeders because direct selection of these traits can be affiliated without being discomposed by the environmental effects. The results obtained are in accordance with previous studies (Kumar et al. 2013; Sulaiman et al. 2020). A lower heritability values and genetic advance were indicated by days to 50% flowering, stem diameter and number of primary branches, with the action of non-additive genes being involved in these traits (Akpan et al. 2016). Based on the overall genetic analysis, plant height, fruit weight, fruit length, fruit girth and yield per plant showed a higher value compared to other traits. These traits have the potential to be manipulated over other traits for an eggplant improvement program especially on yield and its components.

The cluster analysis grouped the individual eggplant accessions based on similarity and affiliation on the basis of vegetative, yield and its components. In this study, the results of clustering analysis clearly grouped the 20 eggplant accessions into four clusters, with a similarity coefficient of 0.35. The wide diversity in eggplant due to the origins and morphological traits has been previously reported by many researchers (Hanifah et al. 2018; Ahmed et al. 2019; Kaushik 2020). Among these four clusters, cluster IV was the most important cluster because this cluster was associated with the highest mean of fruit weight, fruit girth and yield per plant. According to the cluster grouping, it is suggested that a cross between group I and IV would obtain a higher heterosis and vigour progeny based on wide differences between these two groups in terms of vegetative and yield performance.

Susceptibility analysis of 20 eggplant (Solanum spp.) accessions against M. incognita infection suggested that there was a potential resistance trait within the local germplasm. Previous studies have reported that resistance was correlated with nematode reproduction, with a low nematode reproduction compared to the most susceptible genotype indicating a highly resistant response (less 10%), a moderately resistant showing intermediate levels of nematode eggs (less 50%) and susceptible accessions having more than 50% eggs per gram root (Hadisoeganda and Sasser 1982; Hussey and Janssen 2002). Contrary to eggs per gram root, the gall index was not positively correlated with higher nematode population. Our finding showed that higher gall index did not always reflect higher eggs per gram root as reported in previous study (Aydinli et al. 2019). From the 20 eggplant accessions, only S. torvum accession was not affected by RKN infestation and was designated as immune, being concordant with previous reports by other researchers (Bagnaresi et al. 2013; Uehara et al. 2017; Okorley et al. 2018).

Six accessions were resistant to RKN, with accession DINO 03-0200 and DINO 03-0056 showing high resistance. Previous study has shown that the resistant genotypes were able to suppress the reproduction rate of Meloidogyne spp. with improved growth performance in eggplant (Aydinli et al. 2019). These resistant plants might react to the Meloidogyne sp. infection through prevention or limitation of root penetration to juvenile nematodes, with physical root tissue barriers and biochemical secretions may be involved in these resistance mechanisms (Ali et al. 2015). Studies have shown that M. incognita infection can induce gall symptoms on the root system of most Malaysia eggplant accessions. Susceptible eggplant accessions have been reported with high nematode reproduction, root galling and plant growth reduction (Shah et al. 2018; Sarven et al. 2019). This susceptible plant encourages nematode feeding activities that induce gall formation on the roots of eggplant, where it will prevent further growth and elongation of the root and hence, infected plant produces scanty roots (Ali et al. 2015).

 

Conclusion

 

Information of the genetic performance in local eggplant germplasm is important to select future parents for eggplant variety improvement. The 20 studied eggplant (Solanum spp.) accessions varied in terms of their morphology, yield performance and susceptibility against M. incognita infection. The genetic variance of traits studied such as fruit weight, number of fruits per plant, fruit length and yield per plant can be manipulated through direct selection based on the estimation of high broad-sense heritability and genetic advance values. Based on the performance of eggplant accession individually on morphology and yield traits, MTe-01 and MTe-02 from cluster IV can be considered as the potential parents in developing new eggplant cultivars with greater yield production. Meanwhile, two accessions from cluster I (NTH 08-0024 and NTH 08-0041) and two accessions from cluster IV (DINO 03-0056 and DINO 03-0200) have the potential as resistant cultivars in M. incognita management, and they can be utilized for breeding programs. High-yielding and RKN-resistant accession DINO 03-0056 is also recommended to be used as parental line in eggplant breeding programs for simultaneous improvement of yield and RKN resistance.

 

Acknowledgements

 

The authors would like to thank the Faculty of Science and Technology, Universiti Kebangsaan Malaysia (UKM) and Malaysia Agriculture Research and Development Institute (MARDI) for providing research facilities and funding (UKM Research University TAP-K017409 and GP-K017409). Thank you to all the staff of the laboratories, glasshouses and fields for their technical assistance and guidance throughout the execution of the experiments.

 

Author Contributions

 

MNA, TS and NAAS planned the experiments, MNA, NAB and FHSS performed the experiment, MNA, TS and NAAS interpreted the results, MNA, TS and NAAS made the write up and statistically analyzed the data and made illustrations.

 

Conflicts of Interest

 

The authors declare that they have no conflict of interest.

 

Data Availability

 

The data will be made available on acceptable requests to the corresponding author.

 

Ethics Approval

 

Not applicable.

 

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