Genetic Diversity Studies of Twenty Eggplant (Solanum
spp.) Accessions and their Performance against Root-Knot Nematode (Meloidogyne
incognita) Infestation
Mohd Nazarudin Anuar1,3*†, Noraziyah Abd Aziz Shamsudin1†, Tosiah Sadi2, Farah Huda Sjafni Suherman3 and
Nur Adliza Baharom3
1Department of Biological Science and Biotechnology, Faculty of Science
and Technology, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
2Crop and Soil Science Research Centre, MARDI Headquarters, Persiaran
MARDI-UPM, 43400 Serdang, Selangor, Malaysia
3Horticulture Research Centre, MARDI Headquarters, Persiaran MARDI-UPM,
43400 Serdang, Selangor, Malaysia
*For correspondence: nora_aziz@ukm.edu.my
†Contributed equally to this work and are co-first authors
Received 07 May 2021; Accepted 11 September 2021;
Published 15 November 2021
Abstract
Eggplant (Solanum melongena L.) is one of the most widely
consumed vegetables in Malaysia. The information of eggplant genetic diversity
and its resistant to root-knot nematode (RKN) (Meloidogyne incognita) is essential for the eggplant improvement
programs in Malaysia. In this study, 20
Malaysian eggplant (Solanum spp.) accessions were evaluated for ten morpho-agronomical and RKN susceptibility
traits. The experiment was conducted in Malaysian Agricultural Research and
Development Institute (MARDI), Serdang, Selang or using randomized complete
block design (RCBD) with four replications. Data on morpho-agronomical and M.
incognita reproduction were collected and analyzed using SAS statistical
software v. 9.3 (SAS Institute, Cary, NC). The results showed a significant variation
among eggplant accessions for all studied traits (P ≤ 0.01).
All yield-related traits except for number of fruits were positively and
significantly correlated with yield per plant. Their correlation coefficient
values ranged from 0.679 (fruit length) to 0.923 (fruit weight). Unweighted
pair group method with arithmetic mean (UPGMA) dendrogram grouped these 20
eggplant accessions into four clusters, with cluster IV recording the highest
mean of yield and yield component traits. Meloidogyne incognita infection caused root gall symptoms on all the Solanum spp. accessions
except for S. torvum accessions, NTH 08-0024 and NTH 08-0041, thus these
two accessions were considered as immune to RKN. In addition to that, two S.
melongena accessions, DINO 03-0200 and DINO 03-0056 were found highly
resistant while another accession, NTH 08-0131 was categorized as tolerant.
High-yielding and RKN-resistant accession, DINO 03-0056 was identified
as the most important accession due to both its high yield and RKN resistance. ©
2021 Friends Science Publishers
Keywords: Meloidogyne
incognita; Morpho-agronomical traits; Root gall; Solanum
spp.; Yield components
Introduction
Eggplant
production suffers reduced in plant growth and yield due to various pests and
diseases problems, including parasitic nematodes infection. The root-knot
nematode (RKN), Meloidogyne incognita occurs globally, with a broad host
range including Solanaceae group (Papolu et al. 2020). This
nematode has been reported infecting various types of fruit and vegetable crops
in Malaysia, and a broad host range including eggplant (Musa et al.
2020; Leong et al. 2021). Previous studies have reported on RKN
infestation on eggplant genotypes, causing a significant plant growth and yield
reduction (Musa
et al. 2020; Papolu et al. 2020). Infection of Meloidogyne
spp. together with other pathogens, such as Fusarium and Verticillium has been
reported to cause eggplant yield reduction by up to 78% (Musa et
al. 2020).
Until now, the eggplant production heavily relies on the application of
chemicals to combat pests and diseases, including nematode-related problems,
resulting in development of resistance in the targeted pests or pathogen (Sim et
al. 2019; Musa et al. 2020). While chemical application is the most
effective method, it is known to adversely affect the environment and human
health. Hazardous nematicides such as Oxamyl have been
withdrawn from the local market due to possible contamination of groundwater
and health issues (Khairiah et al. 2016; Musa et al. 2020).
Therefore, utilization of resistant varieties is considered the best
alternative to chemical application to overcome nematode infestation in an
integrated management of nematode. Use of the resistant varieties can encourage
the proliferation of local natural enemies while reducing the overall
production costs (Ogunnupebi et al. 2020).
Together with the plant
genetic diversity analysis, this information is important for crop management
and improvement through breeding technique. A successful selection depends on
the value of heritability and genetic advance in relation to the average
performance of the trait. Compared to cultivated species, the wild accession of
eggplant shows a broader genetic diversity, especially in tolerance to abiotic
stresses, pests and diseases (Kaushik et al. 2016; Sargın and Devran 2021). However, the
lack of information about disease-resistant varieties, especially
nematode-caused diseases, has driven this study. Eggplants have also shown a
great level of genetic polymorphisms, especially in vegetative traits such as
fruit shape and color. Therefore, the objectives of this study are to determine
the genetic diversity of 20 local Malaysian eggplant (Solanum spp.) accessions
based on their morpho-agronomical traits, and to identify the most promising
accessions with high yield and RKN-resistant traits.
Materials and Methods
Plant materials and cultural
practices
The
experiment was conducted in the Greenhouse Unit, Horticulture Research Centre,
Malaysia Agriculture and Development Institute (MARDI) Serdang, Selangor,
Malaysia which was located on latitude 101o46'E, and longitude 3o17'N
with an average temperature of 24‒30 ± 2oC
and 70‒81% relative humidity. The experiments were conducted
for two planting seasons, from January to June 2018 for the first season and
from July to December 2018 for the second season. Twenty eggplant (Solanum spp.)
accessions were obtained from MARDI eggplant germplasm collection. The accessions
name, species type and fruit morphology descriptions are shown in Table 1. The
eggplant seeds were pre-germinated in 30-hole seed tray prefilled with peat
moss and maintained for four weeks. Healthy four-week-old seedlings with five
to six true leaves were selected and transplanted into individual 1900 mL pots
containing sterilized soil mixture (70% topsoil: 15% sand: 15% organic matter).
Each eggplant plant was fertilized manually once in two weeks at the rate of 30
g per plant (NPK 16:16:16) for the first time before continuing with 40 g per
plant of NPK 12:12:17 until the experiment ended. Standard cultural practices
and other plant maintenance, such as pest and disease control management and
weeding were carried out as needed.
Morpho-agronomical screening
Four-week-old plants were selected and subjected to the
randomized complete block design (RCBD) with four replications. Each
replication contained five plants per accession, and each was planted 90 cm
between plants. Data on plant height (PH), days to 50% flowering (DT50F), plant
spread (PS), stem diameter (SD), number of primary branches (NB), number of fruits per plant (NF), fruit weight (FW),
fruit length (FL), fruit girth (FG) and yield per plant (YLD) were collected at
12 weeks after transplanting.
Meloidogyne incognita inoculum
preparation
The M. incognita inoculum used in the study was
obtained from RKN cultures deposited in the nematology greenhouse at MARDI
Serdang, Malaysia where they were maintained on susceptible eggplant (S.
melongena) cv. black purple round. The infested eggplant roots were
uprooted, gently washed, and chopped into 1–2 cm sections before being
vigorously shaken in 0.5% NaOCl for five minutes (Hussey and Barker 1973). Root
fragments were washed through 45 µm sieve and suspended in 100 mL distilled
water to collect the nematode eggs. A 10 mL sample of suspension was taken, and
the eggs were counted under stereomicroscope to estimate the egg population.
Final eggs inoculum concentration was adjusted to obtain approximately 5,000
eggs in a 10 mL test tube.
Evaluation of susceptibility
against Meloidogyne incognita
Five plants from each accession were selected and
arranged in a randomized complete block design (RCBD) with four replications.
Two weeks after planting, 5,000 M. incognita eggs were inoculated at the
surrounding of the plant base. The experiment was terminated eight weeks after
the nematode inoculation. At the end of the experiments, roots from each plant
were harvested and gently washed under tap water until cleaned before being
observed under dissecting microscope and rated to gall index (GI) (Bridge and
Page 1980) from 0 (no galls) to 10 (100% galled) scale. Nematode eggs were
extracted using 1% NaOCl (Hussey and Barker 1973) and the numbers of eggs per
gram root (ER) were recorded.
Statistical analysis
The genetic variability among the 20 local eggplant (Solanum
spp.) accessions, broad sense heritability (h2B) and other
genetic parameters were calculated using the following equations (Burton 1952;
Burton and Vane 1953; Johnson et al. 1955; Allard 1960):
(f) Expected genetic advance (GA):
GA% = k x /x h2B x
100
where σ2g
is the genotypic variance, σ2e and MSe
are the mean squares of error, MSg is the mean square of
accessions, r is number of replications, σ2p is
the phenotypic variance, is the grand mean of the traits, h2B is the
heritability, k is the standardized selection differential at 5%
selection intensity (2.063), and σp is the phenotypic standard
deviation.
Unweighted
pair group method with arithmetic mean (UPGMA) and sequential agglomerative
hierarchical non-overlapping (SAHN) clustering method were applied using
NTSYS-pc software version 2.10 (Rohlf 2000) to calculate the genetic relationships
among the eggplant accessions. The morpho-agronomical data were statistically analyzed using
one-way analysis of variance (ANOVA) with means separated by New Duncan
Multiple Range Test (NDMRT) using the SAS statistical
software v. 9.3 (SAS Institute, Cary, NC) to determine different
responses of eggplant accessions in terms of its morpho-agronomical traits. The
correlation coefficient was analyzed to determine the relationships among traits using
Pearson’s correlation. The nematode reproduction data were analyzed using SAS statistical
software v. 9.3 (SAS Institute, Cary, NC). Data of ER and gall index
(GI) were log transformed [log10(x+1)] to homogenize the variances before
subjecting them to one-way ANOVA with means separated by Tukey’s HSD tests (P
≤ 0.05).
Results
Variation among local Malaysian eggplant accessions
The analysis of variance (ANOVA) revealed that the mean
squares due to accessions (A) were highly significant (P < 0.01) for all morpho-agronomical traits observed in this study. However,
non-significant mean squares due to season (S) and season by accession
interaction (S × A) were also obtained for all studied traits (Table 2). The
coefficient of variation (CV) was low to high (ranged from 6.53 to 39.62%). The
data of days to 50% flowering ranged from 37.83 days to 67.93 days with mean of
49.22 days, with the earliest and the latest flowering accession being DINO
03-0062 and DINO 03-0009, respectively (Table 3). Accession DINO 03-0222 had the lowest
value for plant height (36.17 cm) and plant spread (19.24 cm) while accession
NTH 08-0041 had the highest value of plant height and plant spread (158.79 cm
and 84.47 cm, respectively). Stem diameter ranged from 2.57 cm to 6.11 cm with
mean of 3.77 cm while the number of primary branches ranged from 5.75 to 14.05.
Table 1: Description of the 20 Malaysian eggplant (Solanum spp.)
accessions
No. |
Accessions Name |
Species |
Description of the eggplant
fruit |
1 |
NTH 08-0024 |
S. torvum |
Tiny, round, green colour |
2 |
NTH 08-0041 |
S. torvum |
Tiny, round, green colour |
3 |
DINO 03-0200 |
S. melongena |
Small, round, yellow colour |
4 |
DINO 03-0056 |
S. melongena |
Big, round, white colour |
5 |
NTH 08-0077 |
S. melongena |
Small, round, purple colour |
6 |
DINO 03-0223 |
S. melongena |
Small, round, purple colour |
7 |
DINO 03-0014 |
S. melongena |
Medium, oblong, green colour |
8 |
DINO 03-0009 |
S. melongena |
Medium, oblong, green colour |
9 |
DINO 03-0028 |
S. melongena |
Medium, oblong, green colour |
10 |
DINO 03-0038 |
S. melongena |
Medium, oblong, green colour |
11 |
DINO 03-0045 |
S. melongena |
Medium, oblong, green colour |
12 |
DINO 03-0144 |
S. macrocarpon |
Big, round, yellow colour |
13 |
DINO 03-0222 |
S. melongena |
Medium, Long, purple colour |
14 |
NTH 08-0131 |
S. melongena |
Medium, Long, purple colour |
15 |
DINO 03-0075 |
S. ferox |
Small, round, yellow colour |
16 |
DINO 03-0091 |
S. ferox |
Small, round, yellow colour |
17 |
DINO 03-0062 |
S. melongena |
Small, round, white colour |
18 |
DINO 03-0162 |
S. macrocarpon |
Big, round, yellow colour |
19 |
MTe-01 |
S. melongena |
Long, purple colour |
20 |
MTe-02 |
S. melongena |
Big, round, purple colour |
Table 2: Analysis of
variance of morpho-agronomical traits of 20 eggplant (Solanum spp.)
accessions
Sources of Variation |
Season (S) |
Replication (R) |
Accession (A) |
S x A |
Error |
CV (%) |
DF |
1 |
3 |
19 |
19 |
117 |
|
DT50F (days) |
41.88ns |
198.58** |
357.41** |
23.04ns |
10.32 |
6.53 |
PH (cm) |
9.11ns |
766.62** |
6322.47** |
117.52ns |
38.94 |
13.63 |
PS(cm) |
2.57ns |
217.07** |
906.91** |
33.25ns |
19.81 |
13.63 |
SD (cm) |
0.08ns |
1.4** |
6.26** |
0.34ns |
0.17 |
10.97 |
NB |
0.06ns |
10.56** |
51.96** |
2.54ns |
1.23 |
12.35 |
NF |
18.63nns |
100.83** |
847.46** |
14.62ns |
17.32 |
15.97 |
FW(g) |
55.93ns |
6.23** |
13519.77** |
91.05ns |
306.76 |
39.62 |
FL (cm) |
78.69ns |
12.25ns |
350.56** |
19.66ns |
7.81 |
27.57 |
FG (cm) |
9.58ns |
11.46** |
228.06** |
22.41ns |
5.37 |
24.02 |
YLD (g) |
33,180.48ns |
21,090.43** |
2,549,402.12** |
176,819.09ns |
65,079.33 |
31.66 |
DT50F: days to
50 % flowering (day); PH: plant height 12 weeks after transplant (cm); PS:
plant spread 12 weeks after transplant (cm); SD: stem diameter 12 weeks after
transplant (cm); NB: number of primary branches 12 weeks after transplant; NF:
number of fruits per plant; FW: fruit weight (g); FL: fruit length (cm); FG:
fruit girth (cm); YLD: yield per plant (g)
**Significant
at P ≤ 0.01; nsNon-significant at P > 0.05; DF: degree of freedom at 0.05; CV (%): coefficient of
variation (%)
Accession NTH 08-0024 had the
highest number of fruits per plant (67.30) while accession MTe-01 had the
lowest value for number of fruits per plant (13.73). In terms of yield and its
components, accession MTe-02 recorded the highest values for three important
traits, which were yield per plant (1,819.58 g), fruit weight (134.70 g) and
fruit girth (18.83 cm) while accession NTH 08-0041 recorded the lowest values for fruit weight (2.50 g), fruit length
(0.74 cm), fruit girth (1.25 cm) and yield per plant (178.34 g).
Correlation among traits
Pearson’s correlation coefficients between ten
quantitative traits of the 20 eggplant accessions are shown in Table 4. The
yield per plant was highly significant and positively correlated (P ≤
0.01) with its components, such as
fruit weight (0.958), fruit girth (0.904) and fruit length (0.670) but
significantly and negatively correlated with the number of fruits per plant
(-0.502, P ≤ 0.05).
Plant vegetative traits were negatively correlated with yield per plant,
ranging between -0.095 (days to 50% flowering) and -0.492 (stem diameter).
Genetic analysis, broad-sense heritability and genetic
advance
In this study, genotypic variances ranged from 0.76
(stem diameter) to 310,540.35 (yield per plant) and phenotypic variances ranged
from 0.93 (stem diameter) to 375,619.68 (yield per plant) (Table 5). High
genotypic variance values of 310,540.35, 1,651.63 and 785.44 were obtained for
yield per plant, fruit weight and plant height, respectively. Similarly, high
phenotypic variance values of 375,619.68, 1,958.39 and 824.38 were obtained for
yield per plant, fruit weight and plant height, respectively. In this study, genotypic
coefficient variation (GCV) for yield and its related traits were medium to high,
ranging Table 3: Means for 10 morpho-agronomical traits of the 20
eggplant accessions
Accessions |
DT50F (day) |
PH (cm) |
PS (cm) |
SD (cm) |
NB |
NF |
FW (g) |
FL (cm) |
FG (cm) |
YLD (g) |
NTH 08-0024 |
50.88 ± 5.96 ed |
109.38 ± 22.11 b |
58.18 ± 11.08 a |
4.34 ± 0.9 d |
12.35 ± 2.03 d |
67.3 ± 7.57 a |
2.89 ± 0.48 d |
0.75 ± 0.12 h |
1.28 ± 0.21 l |
240.51 ± 40.58 hi |
47.13 ± 5.82 eghf |
158.79 ± 34.1 a |
84.47 ± 9.93 b |
5.16 ± 1.1 c |
10.26 ± 1.88 d |
61.95 ± 7.26 b |
2.5 ± 0.4 d |
0.74 ± 0.11 h |
1.25 ± 0.2 l |
178.34 ± 28.36 i |
|
DINO 03-0200 |
49.95 ± 6.18 ikj |
70.2 ± 7.76 l |
37.34 ± 3.88 i |
3.51 ± 0.74 hg |
7.84 ± 1.16 fe |
29.65 ± 5.49 c |
23.6 ± 4.55 c |
9.37 ± 0.86 gf |
6.94 ± 1.34 j |
615.87 ± 133.62 c |
49.85 ± 10.57 edf |
54.82 ± 12.63 g |
29.16 ± 6.98 c |
3.06 ± 0.67 ji |
8.04 ± 1.15 fe |
18.98 ± 4.74 hgi |
132.96 ± 57.13 a |
15.33 ± 2.55 e |
19.34 ± 4.61 a |
1955.92 ± 430.32 a |
|
NTH 08-0077 |
45.88 ± 5.34 eghf |
65.84 ± 8.69 lk |
35.02 ± 4.58 ed |
4.06 ± 0.82 e |
8.87 ± 1.07 f |
28.35 ± 3.42 ed |
23.33 ± 4.26 c |
3.72 ± 0.84 gf |
7.65 ± 2.09 gf |
511.49 ± 131.11 c |
DINO 03-0223 |
43.48 ± 4.83 ihj |
71.66 ± 9.36 jk |
38.12 ± 1.25 hi |
3.41 ± 0.71 hi |
7.16 ± 1.19 fe |
24.73 ± 4.2 hgf |
20.1 ± 2.47 dc |
3.73 ± 0.78 gf |
10.91 ± 2.34 ef |
672.35 ± 91.18 fge |
DINO 03-0014 |
50.13 ± 10.89 edf |
43.59 ± 5.09 e |
23.19 ± 3.74 f |
2.99 ± 0.63 jk |
7.08 ± 1.19 fe |
19.23 ± 6.82 ji |
14 ± 3.85 dc |
13.51 ± 2.88 dc |
8.01 ± 1.83 ih |
417.74 ± 139.37 c |
DINO 03-0009 |
67.93 ± 8.74 a |
73.11 ± 15.7 de |
38.89 ± 3.63 f |
3.76 ± 0.8 fe |
7.31 ± 1.38 fe |
23.28 ± 3.82 hgf |
17.71 ± 3.83 dc |
14 ± 2.97 dc |
9.07 ± 2.27 gh |
551.25 ± 118.47 dce |
DINO 03-0028 |
51.43 ± 5.65 ed |
77.56 ± 16.65 dc |
41.26 ± 5.05 hi |
3.6 ± 0.77 fg |
7.5 ± 1.47 e |
24.88 ± 4.56 ef |
19.27 ± 3.53 dc |
14.43 ± 3.05 dc |
7.88 ± 1.77 ih |
589.45 ± 125 c |
DINO 03-0038 |
58.35 ± 6.88 b |
67.17 ± 14.43 fe |
35.73 ± 1.36 hi |
3.08 ± 0.66 j |
8.11 ± 1.28 fe |
20.3 ± 6.96 hgi |
14.76 ± 2.69 dc |
15.24 ± 3.41 c |
7.13 ± 1.51 ij |
526.82 ± 122.27 dc |
DINO 03-0045 |
56.33 ± 6.26 cb |
69.81 ± 14.99 e |
37.13 ± 1.33 hi |
3.5 ± 0.74 hg |
7.52 ± 1.21 fe |
25.38 ± 4.76 edf |
19.56 ± 3.49 dc |
14.07 ± 3.23 dc |
6.74 ± 1.43ij |
645.99 ± 139.28 c |
DINO 03-0144 |
45.75 ± 4.95 ghf |
40.46 ± 7.28 c |
21.52 ± 6.37 c |
3.95 ± 0.84 e |
14.05 ± 2.21 d |
38.1 ± 4.73 kj |
31.64 ± 6.06 c |
5.33 ± 1.16 f |
11.87 ± 2.65 ed |
499.65 ± 105.65 b |
DINO 03-0222 |
42.95 ± 4.98 ghf |
36.17 ± 14.46 fe |
19.24 ± 3.93 ef |
2.83 ± 0.6 k |
8.61 ± 1.34 fe |
15.78 ± 1.72 kj |
102.57 ± 28.51 b |
12.66 ± 2.72 de |
18.36 ± 3.91 d |
1794.4 ± 342.06 b |
NTH 08-0131 |
50 ± 6.16 edf |
47.79 ± 10.26 ji |
25.42 ± 1.77 hg |
2.57 ± 0.55 l |
6.88 ± 2.87 c |
16.93 ± 2.98 kji |
115.63 ± 31.4 b |
20.37 ± 4.33 b |
14.84 ± 3.27 c |
1593.01 ± 362.75 a |
DINO 03-0075 |
48.53 ± 5.35 egdf |
61.43 ± 13.19 fg |
32.68 ± 3.91 ef |
5.74 ± 1.22 b |
12.09 ± 7.18 a |
24.75 ± 3.37 egf |
20.48 ± 3.93 dc |
4.27 ± 1 gf |
6.88 ± 1.47 ij |
292.35 ± 91.11 dfge |
DINO 03-0091 |
52.18 ± 5.44 cd |
40.46 ± 8.69 lk |
21.52 ± 4.74 d |
3.95 ± 0.24 e |
14.05 ± 1.01 d |
29.2 ± 3.15 d |
23.71 ± 4.38 dc |
3.31 ± 0.74 g |
4.58 ± 1.02 k |
294.34 ± 73.64 hgi |
DINO 03-0062 |
37.83 ± 6.08 k |
41.16 ± 8.84 lk |
21.9 ± 1.2 hi |
3.04 ± 0.65 jk |
5.75 ± 0.74 g |
20.33 ± 2.98 hi |
16.81 ± 3.89 dc |
3.38 ± 0.76 g |
4.36 ± 0.98 k |
295.77 ± 69.31 hgi |
DINO 03-0162 |
44.7 ± 4.54i gh |
51.87 ± 11.14 hi |
27.59 ± 4.03 ef |
6.11 ± 1.3 a |
13.05 ± 3.28 b |
25.63 ± 3.72 edf |
±
3.63 dc |
3.2 ± 0.7 g |
6.41 ± 1.48 ij |
365.36 ± 79.18 hfg |
MTe-01 |
51.6 ± 6.45 ed |
55.87 ± 12 hg |
29.72 ± 2.21 g |
2.98 ± 0.63 jk |
6.23 ± 1.28 fe |
13.73 ± 1.72 kji |
97.67 ± 25.77 b |
27.28 ± 5.8 a |
13.13 ± 2.7 9 d |
1876.56 ± 396.11 a |
MTe-02 |
39.48 ± 9.91 kj |
50.76 ± 10.9 hi |
27 ± 1.89 hi |
3.76 ± 0.8 fe |
7.85 ± 1.13 fe |
20.6 ± 4.16 hi |
134.7 ± 39.7 a |
13.05 ± 2.82d e |
18.83 ± 4.37 b |
1819.58 ± 396.81 a |
Mean S1 |
49.77 |
64.16 |
34.13 |
3.79 |
9.09 |
27.11 |
41.83 |
10.33 |
9.14 |
782.23 |
Mean S2 |
48.66 |
64.63 |
34.38 |
3.75 |
8.97 |
27.79 |
43.61 |
9.44 |
9.40 |
791.45 |
Total mean |
49.22 |
64.39 |
34.25 |
3.77 |
9.03 |
27.45 |
42.72 |
9.89 |
9.27 |
786.84 |
DT50F: days to 50 % flowering (day); PH: plant height 12
weeks after transplant (cm); PS: plant spread 12 weeks after transplant (cm);
SD: stem diameter 12 weeks after transplant (cm); NB: number of primary
branches 12 weeks after transplant; NF: number of fruits per plant; FW: fruit
weight (g); FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant
(g)
Means ±
standard deviation followed by the same letter did not differ according to
DNMRT tests (P > 0.05)
Table 4. Correlation
coefficient analysis among morpho-agronomical traits for 20 eggplant accessions
|
PH |
PS |
SD |
NB |
NF |
FW |
FL |
FG |
YLD |
|
DT50F |
0.209 |
0.209 |
0.028 |
0.043 |
0.025 |
-0.174 |
0.389** |
-0.106 |
-0.095 |
|
PH |
|
1.000** |
0.397** |
0.077 |
0.752** |
-0.377** |
-0.314** |
-0.474** |
-0.342** |
|
PS |
|
|
0.397** |
0.077 |
0.752** |
-0.377** |
-0.314** |
-0.474** |
-0.342** |
|
SD |
|
|
|
0.674** |
0.468** |
-0.391** |
-0.558** |
-0.419** |
-0.492** |
|
NB |
|
|
|
|
0.525** |
-0.259* |
-0.535** |
-0.286** |
-0.378** |
|
NF |
|
|
|
|
|
-0.459** |
-0.621** |
-0.583** |
-0.502** |
|
FW |
|
|
|
|
|
|
0.558** |
0.904** |
0.958** |
|
FL |
|
|
|
|
|
|
|
0.543** |
0.670** |
|
FG |
|
|
|
|
|
|
|
|
0.904** |
|
DT50F: days to 50 %
flowering (day); PH: plant height 12 weeks after transplant (cm); PS: plant spread 12 weeks after transplant (cm); SD:
stem diameter 12 weeks after transplant (cm); NB: number of primary branches 12
weeks after transplant; NF: number of fruits per plant; FW: fruit weight (g);
FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant (g)
*Significant at P ≤ 0.05. **Significant at P ≤ 0.01
from 39.08 to 91.94% while for vegetative
traits, the values ranged from 13.40 to 45.64% (low to medium). Higher
phenotypic coefficient variation (PCV) was also recorded for yield and
yield-related traits (ranged from 42.22 to 100.11%) compared to vegetative
traits (ranged from 14.91 to 46.76%). Two vegetative traits, days to 50%
flowering (GCV = 13.40%, PCV = 14.91%) and fruit weight (GCV = 91.94%, PCV = 100.11%) had
the lowest and highest of genotypic and phenotypic coefficient variation values,
respectively.
High broad sense heritability (h2B)
estimates were between medium and high for most traits, with the highest
heritability value recorded for plant height (95.28%), followed by number of
fruits per plant (85.70%) and plant spread (84.84%). The highest and the lowest
heritability values were recorded for plant height (95.28%) and fruit girth
(78.94%), respectively. The genetic advance (GA) values ranged from 24.80% for
days to 50% flowering to 173.92% for fruit weight, but in general, the genetic
advance values for vegetative traits were higher than the GA values for yield
and its components.
Clustering analysis
Twenty accessions of local Malaysian eggplant were
clustered into four clusters with a similarity coefficient of 0.21 (Fig. 1). Cluster
I was the smallest group that consisted of both S. torvum
accessions (NTH 08-0024 and NTH
08-0041). Cluster II was the biggest cluster with eight
members, comprising of accessions DINO 03-0075, DINO
03-0091, DINO 03-0162, DINO 03-0144, DINO 03-0062, DINO 03-0200 NTH 08-0077 and DINO
03-0223. Both cluster III and IV shared the same number of
accessions which was five accessions per cluster. Cluster III was comprised of
accession DINO 03-0009, DINO 03-0014, DINO 03-0028, DINO 03-0038 and DINO 03-0045 while
cluster IV consisted of accession MTe-02, DINO 03-0056, DINO 03-0222, NTH 08-0131 and MTe-01.
Both accessions from cluster I showed the highest value
of plant vegetative traits (plant height, plant spread, stem diameter and
number of primary branches), but had the lowest yield per plant (0.175 kg) and
yield related traits (fruit weight, Table 5: Analysis of genetic
variance, broad-sense heritability, and genetic advance for ten
morpho-agronomical traits in 20 eggplant (Solanum spp.) accessions
Traits |
Mean |
𝜎2g |
𝜎2p |
GCV (%) |
PCV (%) |
H2B
(%) |
GA (%) |
DT50F |
49.17 |
43.39 |
53.71 |
13.4 |
14.91 |
80.78 |
24.8 |
PH |
61.4 |
785.44 |
824.38 |
45.64 |
46.76 |
95.28 |
91.77 |
PS |
32.66 |
110.89 |
130.7 |
32.24 |
35 |
84.84 |
61.17 |
SD |
3.74 |
0.76 |
0.93 |
23.33 |
25.78 |
81.91 |
43.5 |
NB |
8.97 |
6.34 |
7.57 |
28.06 |
30.66 |
83.77 |
52.9 |
NF |
26.06 |
103.77 |
121.09 |
39.08 |
42.22 |
85.7 |
74.53 |
FW |
44.21 |
1651.63 |
1958.39 |
91.94 |
100.11 |
84.34 |
173.92 |
FL |
10.14 |
42.84 |
50.66 |
64.56 |
70.2 |
84.58 |
122.31 |
FG |
9.65 |
20.13 |
25.5 |
46.5 |
52.34 |
78.94 |
85.12 |
YLD |
805.85 |
310540 |
375620 |
69.15 |
76.05 |
82.67 |
129.53 |
𝜎2g: genotypic variation; 𝜎2p: phenotypic
variation; GCV: genotypic coefficient variation; PCV: phenotypic coefficient
variation; H2B: broad-sense heritability; GA: genetic
advance; DT50F: days to 50 % flowering (day); PH: plant height 12 weeks after
transplant (cm); PS: plant spread 12 weeks after transplant (cm); SD: stem
diameter 12 weeks after transplant (cm); NB: number of primary branches 12
weeks after transplant; NF: number of fruits per plant; FW: fruit weight (g);
FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant (g)
Fig. 1: Relationship
among the 20 eggplant (Solanum spp.) accessions based on ten
quantitative traits using unweighted pair group method with arithmetic mean
(UPGMA) at a 0.21 similarity coefficient
fruit girth and fruit length) except for number of
fruits per plant (Table 6). Cluster II was comprised of three different
eggplant species, including S. melongena, S. macrocarpon and S.
ferox. This cluster was characterized with the earliest flowering, and
highest mean of stem diameter, number of primary branches and fruit girth.
Cluster III was characterized by small plant appearance (lowest plant height and
plant spread mean) and late flowering while cluster IV showed an average
performance in terms of plant vegetation, but better in fruit morphology and
yield.
Evaluation of 20 eggplant
accessions against Meloidogyne incognita infection
The inoculation of M. incognita
eggs on the eggplant plants showed a significant response among the tested
accessions at eight weeks after the nematode inoculation (P ≤ 0.05) (Table 7). Generally, most of the
eggplant accessions showed a gall symptom on the root system except for S.
torvum accessions (NTH 08-0024 and NTH 08-0041). The eggs per gram root was
higher than the initial egg inoculation (5,000 eggs) for other eggplant
accessions, with accession DINO 03-0062 being the most susceptible with the
highest production of eggs per gram root (32,209 eggs). The gall index values
ranged between 1.11 and 7.52, with accession MTe-01 showing the highest value.
Among the
eggplant accessions, accession DINO 03-0200 and DINO
03-0056 showed a highly-resistant response against M.
incognita with the lowest eggs per gram root (ER) (839 eggs and 915 eggs,
respectively), followed by accession NTH 08-0077 (4,371 eggs); they showed
significant difference (P ≤ 0.05)
compared to the other eggplant accessions (Table 6). Both accession DINO 03-0200
and DINO 03-0056 also produced the lowest gall index (1.11 and 1.63,
respectively) (P ≤ 0.05).
Four accessions (NTH 08-0077, DINO 03-0009, DINO 03-0038 and DINO
03-0028) produced below 50% eggs per gram root compared to
accession DINO 03-0062, indicating
a moderate resistant. Twelve eggplant accessions were susceptible, with egg
production ranging between 16,228 and 32,209 eggs per gram root while the gall
index ranged between 3.53 and 7.52. Accession MTe-01 and MTe-02 showed the
highest gall index (7.52 and 6.92, respectively) (P ≤ 0.05). In these studies, we found that more than half of the eggplant
accessions were susceptible because the M. incognita successfully
reproduced compared to the initial inoculation population.
Table
6: Cluster group and quantitative traits mean
Cluster |
DT50F |
PH |
PS |
SD |
NB |
NF |
FW |
FL |
FG |
YLD |
I |
49.47 |
130.87 |
69.61 |
4.71 |
11.50 |
65.27 |
2.69 |
0.74 |
1.25 |
211.01 |
II |
45.47 |
55.23 |
29.38 |
4.05 |
9.85 |
27.25 |
22.18 |
4.95 |
7.63 |
452.75 |
III |
58.49 |
71.91 |
38.25 |
3.48 |
7.61 |
23.46 |
17.82 |
14.43 |
7.70 |
578.38 |
IV |
46.79 |
49.88 |
26.53 |
3.06 |
7.58 |
17.56 |
119.63 |
17.08 |
17.31 |
1821.48 |
DT50F: days to 50 % flowering (day); PH: plant height 12
weeks after transplant (cm); PS: plant spread 12 weeks after transplant (cm);
SD: stem diameter 12 weeks after transplant (cm); NB: number of primary
branches 12 weeks after transplant; NF: number of fruits per plant; FW: fruit
weight (g); FL: fruit length (cm); FG: fruit girth (cm); YLD: yield per plant
(g)
Table 7: Means comparison of three
different nematode reproduction index on 20 eggplant (Solanum spp.)
accessions
Accession |
ER |
GI |
Host status |
NTH 08-0024 |
0 i |
0 i |
I |
NTH 08-0041 |
0 i |
0 i |
I |
DINO 03-0200 |
839 ± 6 i |
1.11 ± 0.19 h |
HR |
DINO 03-0056 |
915 ± 36 i |
1.63 ± 0.21 h |
HR |
NTH 08-0077 |
4371 ± 80 h |
3.38 ± 0.25 g |
MR |
DINO 03-0223 |
18663 ± 458 def |
3.98 ± 0.46 feg |
S |
DINO 03-0014 |
17514 ± 1123 def |
3.53 ± 0.29 fg |
S |
DINO 03-0009 |
12717 ± 388 g |
3.75 ± 0.72 fg |
MR |
DINO 03-0028 |
11738 ± 469 g |
3.71 ± 0.37 fg |
MR |
DINO 03-0038 |
12386 ± 474 g |
3.79 ± 0.66 feg |
MR |
DINO 03-0045 |
22229 ± 957 c |
3.80 ± 0.47 feg |
S |
DINO 03-0144 |
17216 ± 1812 ef |
4.74 ± 0.42 ced |
S |
DINO 03-0222 |
16228 ± 1266 f |
4.35 ± 0.77 fed |
S |
NTH 08-0131 |
16860 ± 675 ef |
5.07 ± 0.53 cbd |
S |
DINO 03-0075 |
19960 ± 1365 dc |
5.03 ± 0.21 cbd |
S |
DINO 03-0091 |
19204 ± 1643 de |
5.65 ± 1.64 cbd |
S |
DINO 03-0062 |
32209 ± 4847 a |
5.72 ± 0.52 b |
S |
DINO 03-0162 |
21901 ± 395 c |
5.78 ± 0.54 b |
S |
MTe-01 |
26992 ± 1178 b |
7.52 ± 0.48 a |
S |
MTe-02 |
27352 ± 1787 b |
6.92 ± 0.37 a |
S |
ER: eggs per gram root; GI: gall index; Host status is based on production
of eggs per gram root relative to the most susceptible accession (DINO 03-0062)
where no egg detected = immune (I), eggs per gram root < 10% = highly
resistant (HR), eggs per gram root < 50% = moderately resistant (MR), eggs
per gram root > 50% = susceptible (S)
Means ±
standard deviation followed by the same letter did not differ according to
Tukey’s HSD tests (P > 0.05)
Discussion
The combined
analyses of variance for morphology and yield traits from two cropping seasons
showed a highly significant difference (P ≤ 0.01) among the accessions for all parameters measured. These results
strongly indicated that some tested eggplant accessions had a potential to be
used as parents in the eggplant breeding program either to enhance yield or
vegetative traits. However, there
was no significant difference (P > 0.05) between cropping seasons and season by accession interaction
(S × A) for all parameters, revealing that the cropping
season did not affect the performance of eggplant accessions. A high value of
CV for fruit weight and yield per plant indicates that these two traits are
important to differentiate between the eggplant accessions used in this study.
This result was expected as these accessions were selected from different
eggplant Solanum species. Sulaiman et al.
(2020) also reported a significant difference
on these two traits, and concluded that it was related to the origin of each
eggplant accession. A similar study by Caguiat and Hautea (2014) has also shown
the same results on the phenotypic variation among eggplant accessions. Naujeer (2009) strongly suggested that eggplant
breeding programs could be enhanced through
direct selection of yield and its components to produce superior hybrids. Generally,
accession NTH 08-0041 showed a
better performance in terms of morphology while accession DINO 03-0056 had the best
overall performance, especially for yield and yield-related traits except for
the number of fruits in both cropping seasons. Accession NTH 08-0041
which belongs to species S. torvum is known for its bigger size compared
to other eggplant species, but it lacks fruit characteristics and yield. Meanwhile, accession DINO 03‒0056 from species S.
melongena was proven to be a commercial species for eggplant with higher
yield and better fruit appearance. Naujeer (2009) also found similar
correlations between S. torvum and S. melongena species in terms
of their morphology, yield and fruit appearances. Other than that, S. torvum
is more resistant to pest and disease compared to other eggplant species, and suggested as alternative rootstock for more
susceptible eggplant species (Leong et al. 2021).
The highly
significant correlation values between the yield and its components except for
the number of fruits indicated that improvements in these yield-related traits
can lead to improvements in eggplant yield per plant. A highly significant and
positive correlation (P ≤ 0.01)
between yield per plant and its components (fruit weight, fruit length and
fruit girth) have also been reported earlier (Singh et al. 2018; Arti et
al. 2019). Fruit weight, fruit length and fruit girth were the
main contributing traits towards yield per plant, and selection based on these
secondary traits might be effective for developing high-yielding eggplant
cultivars. The negative correlation between vegetative morphology with yield
per plant showed that a small-size eggplant accession such as DINO 03-0056 and DINO 03-0222 could
produce a higher yield per plant. The significant negative correlation between
yield and vegetative morphology was also observed by Thangamani and Jansirani
(2012). However, days to 50% flowering and number of primary branches traits
showed slightly positive impact on yield per plant for some eggplant accession.
Previous studies also observed a positive correlation between days
to 50% flowering and number of primary branches (NB) (Akpan et
al. 2016; Onyia et al. 2020). This contrasting finding might be due
to the different species of eggplant and accessions used in the experiment.
The estimation of the GCV showed a low to high value,
indicated by days to 50% flowering and fruit weight, respectively.
In
this study, high GCV values were obtained in fruit weight and yield per plant,
indicating that there was considerable genetic variations in both traits that
could be used in the future selection to produce better eggplant cultivars,
especially in terms of yield improvement. Meanwhile, the
lowest GCV was recorded by days to 50% flowering, indicating a limited genetic selection and that the trait phenotypic
expression was highly influenced by the environment. The PCV also
recorded a low to high value, with the highest value indicated by fruit weight.
The selection based on high value of PCV, such as in fruit weight and yield per
plant indicates a greater potential is expected in the selection of this
traits, depending on the amount of variability present (Kumar et al.
2020). The value between GCV and PCV obtained from this study had low
difference, indicating that the vegetative traits were not highly affected by
the environmental factors, and successful selection could be achieved based on
the phenotypic values. These findings were corroborated by the previous studies
which observed a slight value difference between GCV and PCV for vegetative
traits in eggplants (Kumar et al. 2020; Sulaiman et al. 2020). Higher PCV values compared to GCV values for all
vegetative and yield traits in this study also indicated the existence of
environmental influence on the phenotypic traits. These small differences
between PCV and GCV values proposing the governance of genetic factors. Hence,
the direct selection on a phenotypic basis would be effective in plant breeding
as that trait are mainly influenced by the genetic factors instead of the
environmental factors. This finding shows the importance of adaptive capacity
to the environment for future crop breeding program. Other
researchers also previously reported the higher values of GCV, PCV and
heritability for yield per plant and its related traits in Solanum species,
conforming the results obtained in these studies (Madhukar et al. 2015;
Yadav et al. 2016).
Heritability is
one of the important genetic components where the proportion of phenotypic
traits or total variance is inherited down to the progeny (Oladosu et al.
2014). A higher range of high broad-sense heritability was observed for all
vegetative and yield component traits, with the highest value indicated by plant height
(PH). High broad-sense heritability (h2B) values also
ensure the success of a breeding program through the selection of
most-consistent parental accessions (Sulaiman et
al. 2020). Yield per plant and its components (number of fruits, fruit
weight, fruit length and fruit girth) in this study showed a high value of broad-sense
heritability and genetic advance (GA), suggesting that a direct selection for both traits
may produce a significant improvement in plant vegetative and yield per plant.
This finding also suggests an additive type of genes action that controls the yield and its
components. Therefore, a higher GA and broad-sense heritabilityvalues,
especially for yield and its components are desired by plant breeders because
direct selection of these traits can be affiliated without being discomposed by
the environmental effects. The results obtained are in accordance with previous studies (Kumar et
al. 2013; Sulaiman et al. 2020). A lower heritability
values and genetic advance were indicated by days to 50% flowering, stem diameter and number of
primary branches, with the action of non-additive genes being involved in these traits (Akpan et
al. 2016). Based on the overall genetic analysis, plant height, fruit weight,
fruit
length, fruit girth and yield per plant showed a higher value compared to other traits. These traits have the potential to be manipulated over
other traits for an eggplant improvement program especially on yield and its
components.
The cluster
analysis grouped the individual eggplant accessions based on similarity and
affiliation on the basis of vegetative, yield and its components. In this
study, the results of clustering analysis clearly grouped the 20 eggplant
accessions into four clusters, with a similarity coefficient of 0.35. The wide diversity in eggplant
due to the origins and morphological traits has been previously reported by
many researchers (Hanifah et al. 2018; Ahmed et al. 2019; Kaushik
2020). Among these four clusters, cluster IV was the most important cluster
because this cluster was associated with the highest mean of fruit weight, fruit girth
and yield per plant. According to the cluster grouping, it is suggested that a cross between
group I and IV would obtain a higher heterosis and vigour progeny based on wide
differences between these two groups in terms of vegetative and yield
performance.
Susceptibility
analysis of 20 eggplant (Solanum spp.) accessions against M.
incognita infection suggested that there was a potential resistance trait within
the local germplasm. Previous studies have reported that resistance was
correlated with nematode reproduction, with a low nematode reproduction
compared to the most susceptible genotype indicating a highly resistant response
(less 10%), a moderately resistant showing intermediate levels of nematode eggs
(less 50%) and susceptible accessions having more than 50% eggs per gram root
(Hadisoeganda and Sasser 1982; Hussey and Janssen 2002). Contrary to eggs per
gram root, the gall index was not positively correlated with higher nematode
population. Our finding showed that higher gall index did not always reflect
higher eggs per gram root as reported in previous study (Aydinli et al.
2019). From the 20 eggplant accessions, only S. torvum accession was not
affected by RKN infestation and was designated as immune, being concordant with
previous reports by other researchers (Bagnaresi et al. 2013; Uehara et
al. 2017; Okorley et al. 2018).
Six accessions
were resistant to RKN, with accession DINO 03-0200 and DINO 03-0056 showing
high resistance. Previous study has shown that the resistant genotypes were
able to suppress the reproduction rate of Meloidogyne spp. with improved
growth performance in eggplant (Aydinli et al. 2019). These resistant
plants might react to the Meloidogyne sp. infection through prevention
or limitation of root penetration to juvenile nematodes, with physical root
tissue barriers and biochemical secretions may be involved in these resistance
mechanisms (Ali et al. 2015). Studies have shown that M. incognita
infection can induce gall symptoms on the root system of most Malaysia eggplant
accessions. Susceptible eggplant accessions have been reported with high
nematode reproduction, root galling and plant growth reduction (Shah et al.
2018; Sarven et al. 2019). This susceptible plant encourages nematode
feeding activities that induce gall formation on the roots of eggplant, where
it will prevent further growth and elongation of the root and hence, infected
plant produces scanty roots (Ali et al. 2015).
Conclusion
Information of the genetic performance in local eggplant
germplasm is important to select future parents for eggplant variety
improvement. The 20 studied eggplant (Solanum spp.) accessions varied in
terms of their morphology, yield performance and susceptibility against M.
incognita infection. The genetic variance of traits studied such as fruit weight, number of
fruits per plant, fruit length and yield per plant can be manipulated through
direct selection based on the estimation of high broad-sense heritability and
genetic advance values. Based on the performance of eggplant accession
individually on morphology and yield traits, MTe-01 and MTe-02 from cluster
IV can be considered as the potential parents in developing new eggplant cultivars
with greater yield production. Meanwhile, two accessions from cluster I (NTH 08-0024 and NTH 08-0041) and two
accessions from cluster IV (DINO 03-0056 and DINO 03-0200) have the potential as resistant cultivars in M.
incognita management, and they can be utilized for breeding programs. High-yielding and RKN-resistant accession DINO
03-0056 is also recommended to be
used as parental line in eggplant breeding programs for simultaneous
improvement of yield and RKN resistance.
Acknowledgements
The authors would like to
thank the Faculty of Science and Technology, Universiti Kebangsaan Malaysia
(UKM) and Malaysia Agriculture Research and Development Institute (MARDI) for providing research facilities and funding (UKM Research University
TAP-K017409 and GP-K017409). Thank you to all the staff of the laboratories,
glasshouses and fields for their technical assistance and guidance throughout
the execution of the experiments.
Author
Contributions
MNA, TS and
NAAS planned the experiments, MNA, NAB and FHSS performed the experiment, MNA,
TS and NAAS interpreted the results, MNA, TS and NAAS made the write up and
statistically analyzed the data and made illustrations.
Conflicts of
Interest
The authors
declare that they have no conflict of interest.
Data Availability
The data will
be made available on acceptable requests to the corresponding author.
Ethics
Approval
Not
applicable.
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